BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D10LP1|AL425859
(858 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1697 1079 0.0
>3x_Contig1697
Length = 16220
Score = 1079 bits (522), Expect = 0.0
Identities = 563/588 (95%), Gaps = 2/588 (0%)
Strand = Plus / Minus
Query: 1 gatcttttccggtgaagcttgacaaaactaaacgatattaacgataagcagatcactgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10487 gatcttttccggtgaagcttgacaaaactaaacgatattaacgataagcagatcactgga 10428
Query: 61 cccagatactggtactctgcacagcgcgagatatatctatatctatatatatatatatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10427 cccagatactggtactctgcacagcgcgagatatatctatatctatatatatatatatat 10368
Query: 121 atdttcdcacaagaatagaacaagataatcacatcacgtgacaagagctgtacctcttcc 180
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10367 atattcacacaagaatagaacaagataatcacatcacgtgacaagagctgtacctcttcc 10308
Query: 181 agctaaactagcagacaataacttctaacaagcgcaggcgcttgatattttctagcactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10307 agctaaactagcagacaataacttctaacaagcgcaggcgcttgatattttctagcactg 10248
Query: 241 ggttgtaacagatgcagangaatgcrmmcnacmaaymcmactactatccaaacactctta 300
|||||||||||||||||| |||||| || || | |||||||||||||||||||||
Sbjct: 10247 ggttgtaacagatgcaga-gaatgcgaa-tacaaatacaactactatccaaacactctta 10190
Query: 301 cacaagcaaacactgccctgtacttagcagtcttttggtctgcttgctccaactcagtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10189 cacaagcaaacactgccctgtacttagcagtcttttggtctgcttgctccaactcagtcc 10130
Query: 361 ttgcctagcagaatttcgggaatttgtcttcggcacaaacatgaagtaaaaaaaaaaagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10129 ttgcctagcagaatttcgggaatttgtcttcggcacaaacatgaagtaaaaaaaaaaagg 10070
Query: 421 cgaacccagcaaaaaccagtattcatgcgacgagatgttattcctgcatgtttggaacgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10069 cgaacccagcaaaaaccagtattcatgcgacgagatgttattcctgcatgtttggaacgt 10010
Query: 481 ttcaaaagtgcaatgtttctccgacgtttgtcaggagacttgcattgacaagtgttattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10009 ttcaaaagtgcaatgtttctccgacgtttgtcaggagacttgcattgacaagtgttattc 9950
Query: 541 ttgttttktttkkttkakkkctttcctkttacaccanktckatctktt 588
||||||| ||| || | ||||||| |||||| | || |||| ||
Sbjct: 9949 ttgttttgtttggttgagggctttcctgttacactatgtcgatctgtt 9902
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.43 0.719 1.35
Gapped
Lambda K H
1.43 0.719 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,416
Number of Sequences: 1807
Number of extensions: 26416
Number of successful extensions: 6721
Number of sequences better than 1.0e-20: 1
length of query: 858
length of database: 10,358,551
effective HSP length: 16
effective length of query: 842
effective length of database: 10,329,639
effective search space: 8697556038
effective search space used: 8697556038
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.9 bits)
S1: 11 (23.2 bits)
S2: 48 (99.7 bits)